Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 PDCD5P1-201ENST00000543528 309 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.47□□□□□ -1.69
SMOQ99835 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 AC092470.1-201ENST00000546187 132 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.47□□□□□ -1.69
SMOQ99835 CENPUP2-201ENST00000555897 1186 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 MIR3682-201ENST00000581338 84 ntBASIC4.47□□□□□ -1.69
SMOQ99835 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.47□□□□□ -1.69
SMOQ99835 RPL23AP92-201ENST00000603609 255 ntBASIC4.47□□□□□ -1.69
SMOQ99835 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.47□□□□□ -1.69
SMOQ99835 AL732618.1-201ENST00000623251 301 ntBASIC4.47□□□□□ -1.69
SMOQ99835 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
SMOQ99835 NEAT1-202ENST00000501122 22743 ntBASIC4.47□□□□□ -1.69
SMOQ99835 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMOQ99835 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.46□□□□□ -1.69
SMOQ99835 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
SMOQ99835 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
SMOQ99835 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SMOQ99835 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
SMOQ99835 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
SMOQ99835 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 RNU6-28P-201ENST00000362378 107 ntBASIC4.46□□□□□ -1.7
SMOQ99835 RNA5SP28-201ENST00000363841 119 ntBASIC4.46□□□□□ -1.7
SMOQ99835 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 AC019155.1-201ENST00000382242 574 ntBASIC4.46□□□□□ -1.7
SMOQ99835 MTCO3P40-201ENST00000392516 676 ntBASIC4.46□□□□□ -1.7
SMOQ99835 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 AC078974.1-201ENST00000411597 223 ntBASIC4.46□□□□□ -1.7
SMOQ99835 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 MTATP6P27-201ENST00000416987 621 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
SMOQ99835 AC069157.1-201ENST00000421749 137 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC233728.2-201ENST00000425348 757 ntBASIC4.46□□□□□ -1.7
SMOQ99835 PSMA6P3-201ENST00000428242 164 ntBASIC4.46□□□□□ -1.7
SMOQ99835 NEK4P1-201ENST00000433383 879 ntBASIC4.46□□□□□ -1.7
SMOQ99835 NUTF2P7-201ENST00000453086 375 ntBASIC4.46□□□□□ -1.7
SMOQ99835 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 RPS20P21-201ENST00000466859 343 ntBASIC4.46□□□□□ -1.7
SMOQ99835 RN7SL41P-201ENST00000476144 297 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC034222.1-201ENST00000494052 532 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.46□□□□□ -1.7
SMOQ99835 FAM92A1P2-202ENST00000504766 877 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.46□□□□□ -1.7
SMOQ99835 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.46□□□□□ -1.7
SMOQ99835 AC093677.1-201ENST00000514414 678 ntBASIC4.46□□□□□ -1.7
SMOQ99835 RNA5SP360-201ENST00000516555 118 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 AC100770.1-201ENST00000532310 322 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC024224.1-201ENST00000538284 609 ntBASIC4.46□□□□□ -1.7
SMOQ99835 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.46□□□□□ -1.7
SMOQ99835 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.46□□□□□ -1.7
SMOQ99835 AC068135.2-201ENST00000569293 1028 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AC034268.2-201ENST00000571784 482 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AL365503.1-201ENST00000605247 905 ntBASIC4.46□□□□□ -1.7
SMOQ99835 AL359880.1-201ENST00000621879 266 ntBASIC4.46□□□□□ -1.7
SMOQ99835 MIR3688-2-201ENST00000636963 87 ntBASIC4.46□□□□□ -1.7
SMOQ99835 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 AC105074.1-201ENST00000623380 3095 ntBASIC4.46□□□□□ -1.7
SMOQ99835 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SMOQ99835 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SMOQ99835 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.46□□□□□ -1.7
SMOQ99835 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 AC007529.1-201ENST00000418574 2178 ntBASIC4.46□□□□□ -1.7
SMOQ99835 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMOQ99835 AC011978.2-201ENST00000569835 2054 ntBASIC4.45□□□□□ -1.7
SMOQ99835 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.45□□□□□ -1.7
SMOQ99835 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
SMOQ99835 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMOQ99835 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.45□□□□□ -1.7
SMOQ99835 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMOQ99835 AC067945.1-201ENST00000342609 618 ntBASIC4.45□□□□□ -1.7
SMOQ99835 SNORD82-201ENST00000365530 70 ntBASIC4.45□□□□□ -1.7
SMOQ99835 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMOQ99835 SNORA70C-201ENST00000384538 135 ntBASIC4.45□□□□□ -1.7
SMOQ99835 RNA5SP372-201ENST00000390836 115 ntBASIC4.45□□□□□ -1.7
SMOQ99835 RNU6-780P-201ENST00000391030 104 ntBASIC4.45□□□□□ -1.7
SMOQ99835 CIR1P3-201ENST00000405137 479 ntBASIC4.45□□□□□ -1.7
SMOQ99835 AL590002.1-201ENST00000406554 418 ntBASIC4.45□□□□□ -1.7
SMOQ99835 CCNG1P1-201ENST00000406783 885 ntBASIC4.45□□□□□ -1.7
SMOQ99835 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.45□□□□□ -1.7
SMOQ99835 AC245052.5-201ENST00000416320 649 ntBASIC4.45□□□□□ -1.7
SMOQ99835 AL161631.1-201ENST00000417933 486 ntBASIC4.45□□□□□ -1.7
SMOQ99835 RPL30P16-201ENST00000419341 429 ntBASIC4.45□□□□□ -1.7
SMOQ99835 RPS15AP40-201ENST00000419621 391 ntBASIC4.45□□□□□ -1.7
SMOQ99835 AL590609.2-201ENST00000421430 368 ntBASIC4.45□□□□□ -1.7
SMOQ99835 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.45□□□□□ -1.7
SMOQ99835 AC004975.1-201ENST00000428733 208 ntBASIC4.45□□□□□ -1.7
SMOQ99835 NANOGP6-201ENST00000429190 847 ntBASIC4.45□□□□□ -1.7
SMOQ99835 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.45□□□□□ -1.7
SMOQ99835 ARPC3P1-201ENST00000437218 533 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms