Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC012435.1-202ENST00000568772 240 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC012417.1-201ENST00000582307 1039 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 MTCYBP22-201ENST00000603788 447 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 RNA5SP108-201ENST00000605921 117 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC092354.1-201ENST00000606057 376 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC069200.1-201ENST00000609511 323 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 AC008443.7-201ENST00000622195 246 ntBASIC4.28□□□□□ -1.72
VPS52Q8N1B4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS52Q8N1B4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.28□□□□□ -1.73
VPS52Q8N1B4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AL161912.2-201ENST00000565707 3007 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 Y_RNA.51-201ENST00000362725 102 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 RNU4-24P-201ENST00000364565 139 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 RNU6-660P-201ENST00000364566 109 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 RNA5SP167-201ENST00000365461 116 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC016769.3-201ENST00000396562 315 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 BTBD10P2-201ENST00000404779 676 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 TPMTP3-201ENST00000411928 735 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AL391219.1-201ENST00000422570 483 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 MED14P1-201ENST00000430517 648 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 ARPC3P5-201ENST00000448802 534 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 HMGB3P22-202ENST00000451823 572 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 RPL21P103-201ENST00000479921 488 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC108941.1-201ENST00000502853 530 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 TMEM251P1-201ENST00000503717 318 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC091435.1-201ENST00000505442 584 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 MTND5P13-201ENST00000513046 1079 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC093853.1-201ENST00000515689 483 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 Vault.1-201ENST00000516474 102 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AL133457.1-201ENST00000564251 987 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 ROCK1P1-201ENST00000573767 549 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC008507.1-201ENST00000587506 734 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC020914.4-201ENST00000597690 277 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 BNIP3P11-201ENST00000603878 563 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC091167.4-201ENST00000605079 184 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC073114.1-201ENST00000612027 490 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AL158063.1-201ENST00000615349 536 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 AP005264.7-201ENST00000625003 745 ntBASIC4.27□□□□□ -1.73
VPS52Q8N1B4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS52Q8N1B4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 SNORA63.1-201ENST00000362493 131 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RNU4-21P-201ENST00000362802 126 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 Y_RNA.333-201ENST00000365274 102 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RNU6-723P-201ENST00000383973 107 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RN7SKP56-201ENST00000410513 331 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RPL7P8-201ENST00000411964 730 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 BTF3L4P1-201ENST00000413813 468 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC093578.1-201ENST00000415219 368 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AL512649.1-201ENST00000428997 581 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 MTCO2P16-201ENST00000436962 677 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 USP9YP34-201ENST00000453983 808 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 RNU7-136P-201ENST00000458819 69 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 PPIAP15-201ENST00000479662 484 ntBASIC4.26□□□□□ -1.73
VPS52Q8N1B4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS52Q8N1B4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms