Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 AL161734.1-201ENST00000609720 557 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 MIR6891-201ENST00000618788 93 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 MTND5P42-201ENST00000637720 498 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 NUP58P1-201ENST00000502546 1738 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 AC022031.1-201ENST00000585985 2593 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VRK3Q8IV63 RLIMP2-201ENST00000427891 1563 ntBASIC4.4□□□□□ -1.71
VRK3Q8IV63 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.4□□□□□ -1.71
VRK3Q8IV63 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 Y_RNA.46-201ENST00000362695 102 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RNU1-130P-201ENST00000363930 160 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RNU6-289P-201ENST00000364093 107 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RNU6-952P-201ENST00000391164 108 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RPL23AP32-201ENST00000395315 459 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AL122016.1-201ENST00000403365 367 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 MTCO3P12-201ENST00000416718 547 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 MTATP6P18-201ENST00000417994 673 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 MTCO2P5-201ENST00000422621 426 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 RPL36AP53-201ENST00000432891 316 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RPS27AP17-201ENST00000463344 455 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC034159.1-201ENST00000513885 583 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 Vault.3-201ENST00000516676 95 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 RN7SKP92-201ENST00000517266 244 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AP003072.2-201ENST00000527756 676 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AL121821.2-201ENST00000556081 394 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 SUB1P2-201ENST00000556401 297 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 BNIP3P22-201ENST00000593399 556 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC113139.1-201ENST00000605049 239 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 MIR98-201ENST00000606724 119 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 DISC2.1-201ENST00000612827 205 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC024940.5-201ENST00000622889 474 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC091905.2-201ENST00000623143 306 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VRK3Q8IV63 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC090229.1-201ENST00000590983 1609 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
VRK3Q8IV63 AC005332.5-201ENST00000591222 2919 ntBASIC4.39□□□□□ -1.71
VRK3Q8IV63 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VRK3Q8IV63 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 RNU6-74P-201ENST00000384235 107 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RNU6-729P-201ENST00000384399 107 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 MIR129-1-201ENST00000384972 72 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 MIR195-201ENST00000385194 87 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL136131.1-201ENST00000406079 803 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RPL37P18-201ENST00000411602 243 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC004987.3-201ENST00000413879 771 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL139095.3-201ENST00000419672 1203 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL353729.1-201ENST00000425044 720 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL365400.1-201ENST00000431854 640 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RPS3AP54-201ENST00000435535 734 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL136380.1-201ENST00000447970 162 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 AL162591.2-201ENST00000449634 317 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RNU6-261P-201ENST00000459506 102 ntBASIC4.38□□□□□ -1.71
VRK3Q8IV63 RPL31P50-201ENST00000471002 296 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms