Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC144NLQ6NUI1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC144NLQ6NUI1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC144NLQ6NUI1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC144NLQ6NUI1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC144NLQ6NUI1 ELF2P3-201ENST00000445099 1506 ntBASIC3.9□□□□□ -1.79
CCDC144NLQ6NUI1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 Z98745.1-201ENST00000402553 494 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 RNU4-65P-201ENST00000410473 140 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC016769.2-201ENST00000414815 475 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 SSXP9-201ENST00000417503 292 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC006466.1-201ENST00000438721 289 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL121871.1-201ENST00000443413 436 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC013267.1-201ENST00000458227 267 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 RPS3AP41-201ENST00000462701 778 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC109927.2-201ENST00000506416 303 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC009646.1-201ENST00000510455 318 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC114797.1-201ENST00000514003 728 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 RNU6-718P-201ENST00000516166 105 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AP004371.1-201ENST00000525240 214 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 SUB1P2-201ENST00000556401 297 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC022726.1-201ENST00000587475 207 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 SNRPGP15-201ENST00000600149 222 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL391646.1-201ENST00000603860 190 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AL136363.1-201ENST00000605349 337 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 FAM27B-201ENST00000610601 213 ntBASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144NLQ6NUI1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 MFSD8-242ENST00000641690 4199 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNU6-223P-201ENST00000362830 107 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 SNORA58B-201ENST00000364259 136 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNU6-335P-201ENST00000364563 113 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNU4-12P-201ENST00000365233 139 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNA5SP235-201ENST00000365411 114 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNU6-456P-201ENST00000384493 107 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AL590002.1-201ENST00000406554 418 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 BTF3P7-201ENST00000407097 488 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 U3.35-201ENST00000408405 208 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNU2-43P-201ENST00000410306 190 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RN7SKP267-201ENST00000410381 285 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 RNA5SP113-201ENST00000410486 84 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 MTCO3P12-201ENST00000416718 547 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 BX510359.2-201ENST00000417920 305 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 MTCO2P19-201ENST00000427513 598 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 NRBF2P3-201ENST00000432731 865 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 HMGN2P21-201ENST00000447764 270 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 NPM1P49-201ENST00000448027 714 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 BTF3P6-201ENST00000448054 499 ntBASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144NLQ6NUI1 AC005008.1-201ENST00000456151 612 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms