Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AL049777.1-201ENST00000622740 518 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC092326.2-201ENST00000624772 1561 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC111188.2-201ENST00000529697 1387 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 DEFB109C-201ENST00000382575 264 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 DEFB109B-201ENST00000382656 264 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC073264.1-201ENST00000411508 416 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 RPS3AP9-201ENST00000417027 792 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC012065.2-201ENST00000421295 375 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 RPL37P4-201ENST00000448908 268 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 UBE2DNL-203ENST00000474922 222 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC021146.1-201ENST00000511202 716 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC090330.1-201ENST00000588646 764 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC018645.2-201ENST00000609151 472 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC009269.6-201ENST00000621778 588 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 SNORA50A-202ENST00000629536 136 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.69□□□□□ -1.82
SHROOM1Q2M3G4 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AP002088.1-201ENST00000382740 395 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 MT-TC-201ENST00000387405 66 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC002542.1-201ENST00000440683 193 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC016696.1-201ENST00000446949 318 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 RPL7P59-201ENST00000447700 943 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 SSXP4-201ENST00000451349 245 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC244505.3-201ENST00000454598 187 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC021205.2-201ENST00000480069 347 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC008427.1-201ENST00000503102 655 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC097462.2-201ENST00000504623 481 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 HMGB3P15-201ENST00000507326 574 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 HIGD1AP6-201ENST00000521833 279 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 PSMA2P1-201ENST00000526365 646 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 BPTFP1-201ENST00000579209 492 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 RPAP2P1-201ENST00000603626 1168 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AL158050.2-201ENST00000605336 568 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC016877.3-201ENST00000606778 504 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AL450489.1-201ENST00000612071 468 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC092650.2-201ENST00000619984 902 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHROOM1Q2M3G4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL353746.1-201ENST00000566293 6881 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 RNU6-1151P-201ENST00000384684 107 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 MIR620-201ENST00000385232 95 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 RNU6-575P-201ENST00000411326 105 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL590103.1-201ENST00000434488 307 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 ARF4P4-201ENST00000439608 520 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 TXNP1-201ENST00000441872 371 ntBASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM1Q2M3G4 AL592437.1-201ENST00000443781 492 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms