Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR4509-2-201ENST00000583920 94 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.66□□□□□ -1.82
GABPAQ06546 AC091057.3-201ENST00000602684 733 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 RMST_8.1-201ENST00000610287 165 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 MIR4509-1-201ENST00000618224 94 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.66□□□□□ -1.82
GABPAQ06546 AL157770.1-201ENST00000623049 439 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AC091903.1-201ENST00000624322 454 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AL512506.2-201ENST00000624472 458 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
GABPAQ06546 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 AC066616.2-201ENST00000559334 1481 ntBASIC3.66□□□□□ -1.82
GABPAQ06546 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.65□□□□□ -1.82
GABPAQ06546 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
GABPAQ06546 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.65□□□□□ -1.82
GABPAQ06546 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GABPAQ06546 AC073325.2-201ENST00000339545 159 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 RNU6-492P-201ENST00000363035 104 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 SNORA80A-201ENST00000363922 136 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 SNORD15B-201ENST00000384714 146 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 RNU6-1300P-201ENST00000391046 108 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AL355379.1-201ENST00000405542 640 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.65□□□□□ -1.83
GABPAQ06546 HMGB3P6-201ENST00000444896 598 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AL358794.1-201ENST00000445689 381 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC146507.1-201ENST00000468335 354 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC010301.1-201ENST00000473936 355 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 VPS26AP1-201ENST00000483197 979 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GABPAQ06546 AC084024.2-201ENST00000503480 791 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.65□□□□□ -1.83
GABPAQ06546 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.65□□□□□ -1.83
GABPAQ06546 USP9YP5-201ENST00000511770 630 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AP001207.2-201ENST00000519490 539 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.65□□□□□ -1.83
GABPAQ06546 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.65□□□□□ -1.83
GABPAQ06546 AP001317.1-201ENST00000531194 960 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
GABPAQ06546 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.65□□□□□ -1.83
GABPAQ06546 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.65□□□□□ -1.83
GABPAQ06546 OR6C73P-201ENST00000546432 358 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 LSM6P2-201ENST00000552208 177 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 MTCYBP23-201ENST00000558717 1102 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC068722.2-201ENST00000618734 544 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC022960.3-201ENST00000619794 441 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 U7.8-201ENST00000619968 63 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.65□□□□□ -1.83
GABPAQ06546 Z99496.1-201ENST00000469424 1477 ntBASIC3.65□□□□□ -1.83
GABPAQ06546 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GABPAQ06546 DBF4P1-201ENST00000412976 1892 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GABPAQ06546 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GABPAQ06546 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GABPAQ06546 SNORD116-12-201ENST00000384468 92 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 MIR634-201ENST00000385208 97 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 SNORD67-201ENST00000390833 111 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 MTND2P16-201ENST00000419987 799 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 GLRXP1-201ENST00000423261 334 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 DPRXP1-201ENST00000426312 460 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.64□□□□□ -1.83
GABPAQ06546 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 ISCA1P2-201ENST00000438679 421 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.64□□□□□ -1.83
GABPAQ06546 RPS12P18-201ENST00000442381 270 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 AL590399.6-201ENST00000446396 307 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.64□□□□□ -1.83
GABPAQ06546 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.64□□□□□ -1.83
GABPAQ06546 AC097462.2-201ENST00000504623 481 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.64□□□□□ -1.83
GABPAQ06546 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GABPAQ06546 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 RNU1-103P-201ENST00000516502 125 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 RNU4-60P-201ENST00000517239 135 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 IGKV2D-36-201ENST00000518643 226 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.64□□□□□ -1.83
GABPAQ06546 AP000790.1-201ENST00000528891 737 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 BNIP3P11-201ENST00000603878 563 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GABPAQ06546 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.64□□□□□ -1.83
GABPAQ06546 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GABPAQ06546 AL355578.1-201ENST00000607405 1328 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
GABPAQ06546 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GABPAQ06546 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
GABPAQ06546 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABPAQ06546 Y_RNA.111-201ENST00000363248 100 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 RPL5P18-201ENST00000406671 891 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 MIR1250-201ENST00000408098 113 ntBASIC3.63□□□□□ -1.83
GABPAQ06546 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.63□□□□□ -1.83
GABPAQ06546 PTP4A1P5-201ENST00000420305 455 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms