Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU6-282P-201ENST00000365357 103 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 RNA5SP332-201ENST00000391063 115 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 CIR1P3-201ENST00000405137 479 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 RNA5SP113-201ENST00000410486 84 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 MTCO3P12-201ENST00000416718 547 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC007283.2-201ENST00000424739 197 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AL450023.3-201ENST00000440592 271 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 RPL21P89-201ENST00000444021 467 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AC013267.1-201ENST00000458227 267 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AL049714.1-201ENST00000466686 347 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC020893.1-201ENST00000502452 580 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 MRPS33P2-201ENST00000507850 322 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC026801.2-201ENST00000515352 425 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC022616.3-201ENST00000523940 148 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AC018630.1-201ENST00000541376 925 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX6-1P78426 AL133153.1-201ENST00000557756 303 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AP001429.1-201ENST00000602568 530 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 HMGN2P28-201ENST00000606102 262 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC092954.2-201ENST00000609103 430 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC015914.2-201ENST00000618167 288 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 MIR6130-201ENST00000619419 109 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX6-1P78426 AC019226.1-201ENST00000625666 515 ntBASIC4.3□□□□□ -1.72
NKX6-1P78426 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX6-1P78426 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX6-1P78426 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX6-1P78426 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX6-1P78426 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX6-1P78426 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX6-1P78426 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NKX6-1P78426 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX6-1P78426 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 SAMMSON-226ENST00000642089 1582 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NKX6-1P78426 RNU6-1155P-201ENST00000363554 107 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 RNU6-1085P-201ENST00000363576 107 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 RNU6-1097P-201ENST00000363586 107 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AC068538.1-201ENST00000376856 336 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NKX6-1P78426 SNORD3H-201ENST00000384486 214 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 CALM2P3-201ENST00000400429 449 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 RNU4-65P-201ENST00000410473 140 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AF186996.5-201ENST00000418098 904 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 RPL23AP38-201ENST00000423801 469 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC092162.1-201ENST00000432828 434 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AL596276.1-201ENST00000434465 418 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 SLC25A18P1-201ENST00000449385 454 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AC140076.1-201ENST00000449897 361 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 FGF7P6-202ENST00000451282 293 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC007967.1-201ENST00000455422 1159 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 RPS17P2-201ENST00000461663 408 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC135721.1-201ENST00000497954 479 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.29□□□□□ -1.72
NKX6-1P78426 DEFB108D-201ENST00000527787 222 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 MTCYBP41-201ENST00000528913 1123 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AL110118.1-201ENST00000553543 400 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX6-1P78426 TVP23CP2-201ENST00000571473 623 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 SNORA59B-202ENST00000578183 701 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX6-1P78426 AC068790.5-201ENST00000602741 355 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AL139286.1-201ENST00000604465 483 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX6-1P78426 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX6-1P78426 LINC01109-201ENST00000603837 3081 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 AC063976.2-201ENST00000425667 3556 ntBASIC4.29□□□□□ -1.72
NKX6-1P78426 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX6-1P78426 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms