Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MTATP6P19-201ENST00000413797 659 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.84□□□□□ -1.95
CXCL12P48061 HMGB1P45-201ENST00000435986 653 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL12P48061 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL12P48061 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL12P48061 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL12P48061 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL12P48061 AC008280.2-201ENST00000455473 307 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 AC128713.1-201ENST00000471495 306 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.84□□□□□ -1.95
CXCL12P48061 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.84□□□□□ -1.95
CXCL12P48061 MTCO2P9-201ENST00000503214 694 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 AC117522.3-201ENST00000507974 584 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 AC005921.1-201ENST00000510589 286 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 RNU6-334P-201ENST00000517072 102 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 SCARNA20.6-201ENST00000517251 106 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.84□□□□□ -1.95
CXCL12P48061 LLPHP1-201ENST00000603571 367 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 BNIP3P10-201ENST00000605360 577 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 MIR6817-201ENST00000615588 66 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 MIR6864-201ENST00000617935 70 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 AC092608.3-201ENST00000625017 386 ntBASIC2.84□□□□□ -1.95
CXCL12P48061 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL12P48061 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CXCL12P48061 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CXCL12P48061 MTND4P8-201ENST00000514997 1362 ntBASIC2.84□□□□□ -1.96
CXCL12P48061 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL12P48061 NSRP1P1-201ENST00000444067 1693 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 RPL7P26-201ENST00000333817 754 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 RNA5SP295-201ENST00000362655 121 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 RNU1-112P-201ENST00000364401 164 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CXCL12P48061 MIR184-201ENST00000384962 84 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC092170.1-201ENST00000440211 356 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.83□□□□□ -1.96
CXCL12P48061 MOB1AP2-201ENST00000446060 614 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 MTND1P33-201ENST00000446251 917 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 AL096803.2-201ENST00000450032 677 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 RPL23AP15-201ENST00000450202 459 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 AC015724.1-201ENST00000478577 156 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 HSPE1P6-201ENST00000479457 291 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC010265.1-201ENST00000513509 211 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 AC096725.1-201ENST00000514266 313 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 RN7SKP60-201ENST00000516985 239 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 SNORA31.21-201ENST00000517180 77 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL12P48061 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.83□□□□□ -1.96
CXCL12P48061 AP001646.1-201ENST00000527936 915 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 MTND2P26-201ENST00000528255 1029 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 OR4R2P-201ENST00000530815 597 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 OR5D17P-201ENST00000531492 978 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 AC095057.3-201ENST00000567102 1157 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL12P48061 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.83□□□□□ -1.96
CXCL12P48061 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.83□□□□□ -1.96
CXCL12P48061 AL592295.2-201ENST00000612578 206 ntBASIC2.83□□□□□ -1.96
CXCL12P48061 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL12P48061 SNORA31-201ENST00000362607 130 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 XGY1-201ENST00000381172 446 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 SNORD65C-201ENST00000390962 71 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 SNORA40.4-201ENST00000390971 128 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL12P48061 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 DUTP6-201ENST00000425573 462 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 ZYG11AP1-201ENST00000430329 837 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL12P48061 YWHAZP8-201ENST00000436935 731 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 HMGB3P6-201ENST00000444896 598 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 GXYLT1P1-201ENST00000446657 490 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 snoU13.7-201ENST00000459220 104 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC010468.1-201ENST00000461022 817 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AP002884.2-201ENST00000471647 395 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 RPL21P103-201ENST00000479921 488 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC108078.3-201ENST00000502633 489 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.82□□□□□ -1.96
CXCL12P48061 AC008885.2-201ENST00000509506 930 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.82□□□□□ -1.96
CXCL12P48061 AC005351.1-201ENST00000511152 786 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 RNA5SP24-201ENST00000516478 95 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.82□□□□□ -1.96
CXCL12P48061 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL12P48061 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL12P48061 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL12P48061 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.82□□□□□ -1.96
CXCL12P48061 AC093510.2-201ENST00000562820 896 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 SNORD53-201ENST00000579969 78 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms