Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BRCC3P46736 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
BRCC3P46736 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
BRCC3P46736 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRCC3P46736 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRCC3P46736 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC117529.2-201ENST00000512159 2068 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRCC3P46736 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRCC3P46736 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
BRCC3P46736 snoZ40.1-201ENST00000364540 72 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
BRCC3P46736 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
BRCC3P46736 RNU6-906P-201ENST00000384700 70 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 MIR217-201ENST00000384817 110 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AL139098.1-201ENST00000407291 389 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 RNA5SP229-201ENST00000410809 99 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 MTATP6P20-201ENST00000414147 562 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AL356320.2-201ENST00000417263 507 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.45□□□□□ -1.86
BRCC3P46736 AL353705.1-201ENST00000433468 480 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.45□□□□□ -1.86
BRCC3P46736 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.45□□□□□ -1.86
BRCC3P46736 HMGN2P21-201ENST00000447764 270 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AL034418.1-201ENST00000448675 860 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 HMGB3P8-201ENST00000449709 577 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AP001992.1-205ENST00000462248 379 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BRCC3P46736 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC078817.1-201ENST00000492623 435 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC020893.1-201ENST00000502452 580 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC048346.1-201ENST00000510247 144 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.45□□□□□ -1.86
BRCC3P46736 ARL2BPP5-201ENST00000523141 481 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 PDCL2P2-201ENST00000533651 189 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC023813.2-201ENST00000564321 469 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 MIR4325-201ENST00000583049 90 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 VN1R83P-201ENST00000595685 445 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCC3P46736 AL035411.2-201ENST00000604022 421 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC124312.4-201ENST00000605533 310 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC012531.5-201ENST00000611375 151 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRCC3P46736 AL162274.2-201ENST00000614406 332 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.45□□□□□ -1.86
BRCC3P46736 AC109454.4-201ENST00000623411 649 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 AC018692.3-201ENST00000623929 123 ntBASIC3.45□□□□□ -1.86
BRCC3P46736 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
BRCC3P46736 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.44□□□□□ -1.86
BRCC3P46736 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
BRCC3P46736 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
BRCC3P46736 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 AL359893.1-201ENST00000447628 1580 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
BRCC3P46736 MIR30E-201ENST00000362104 92 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 RNA5SP167-201ENST00000365461 116 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 RNU6-1226P-201ENST00000384317 107 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 RNU6-921P-201ENST00000384361 107 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AL355379.1-201ENST00000405542 640 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC073264.1-201ENST00000411508 416 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC096664.2-201ENST00000411843 406 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC007899.1-201ENST00000412776 775 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.44□□□□□ -1.86
BRCC3P46736 RPS3AP37-201ENST00000419176 745 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC012065.2-201ENST00000421295 375 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC005517.2-201ENST00000424673 553 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 Z93242.1-201ENST00000427102 353 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 BX890604.2-201ENST00000427883 474 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.44□□□□□ -1.86
BRCC3P46736 TXNP1-201ENST00000441872 371 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AL589880.1-201ENST00000448271 287 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.44□□□□□ -1.86
BRCC3P46736 AC092155.2-201ENST00000454675 477 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.44□□□□□ -1.86
BRCC3P46736 SNRPGP3-201ENST00000469405 227 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 DYNLL1P6-201ENST00000503440 264 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.44□□□□□ -1.86
BRCC3P46736 GMPSP1-201ENST00000514075 579 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 RNU6-885P-201ENST00000516607 104 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BRCC3P46736 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.44□□□□□ -1.86
BRCC3P46736 AL389895.1-201ENST00000554127 252 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.44□□□□□ -1.86
BRCC3P46736 VN1R92P-201ENST00000598511 928 ntBASIC3.44□□□□□ -1.86
BRCC3P46736 YWHAQP7-201ENST00000603536 658 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms