Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF4P18848 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ATF4P18848 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATF4P18848 RNA5SP85-201ENST00000365378 119 ntBASIC4.82□□□□□ -1.64
ATF4P18848 Y_RNA.399-201ENST00000383955 105 ntBASIC4.82□□□□□ -1.64
ATF4P18848 Y_RNA.460-201ENST00000384255 102 ntBASIC4.82□□□□□ -1.64
ATF4P18848 PRELID1P1-201ENST00000403549 660 ntBASIC4.82□□□□□ -1.64
ATF4P18848 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF4P18848 DPPA2P3-201ENST00000411853 655 ntBASIC4.82□□□□□ -1.64
ATF4P18848 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 AL160275.3-201ENST00000423876 471 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF4P18848 AF228730.2-201ENST00000438784 848 ntBASIC4.82□□□□□ -1.64
ATF4P18848 KNOP1P3-201ENST00000446933 426 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AC008264.1-201ENST00000447612 367 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AC018638.3-201ENST00000461273 132 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AP000873.1-201ENST00000463987 400 ntBASIC4.82□□□□□ -1.64
ATF4P18848 RN7SL413P-201ENST00000482700 297 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF4P18848 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF4P18848 AC093870.1-201ENST00000506837 213 ntBASIC4.82□□□□□ -1.64
ATF4P18848 MTCO3P9-201ENST00000506989 781 ntBASIC4.82□□□□□ -1.64
ATF4P18848 HMGN1P9-201ENST00000515212 298 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATF4P18848 AP003396.4-201ENST00000527574 265 ntBASIC4.82□□□□□ -1.64
ATF4P18848 RPA2P3-201ENST00000533268 770 ntBASIC4.82□□□□□ -1.64
ATF4P18848 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF4P18848 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF4P18848 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF4P18848 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.82□□□□□ -1.64
ATF4P18848 MTCYBP13-201ENST00000578634 1093 ntBASIC4.82□□□□□ -1.64
ATF4P18848 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 RPL29P33-201ENST00000587474 316 ntBASIC4.82□□□□□ -1.64
ATF4P18848 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 BNIP3P25-201ENST00000596023 559 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AL353621.2-201ENST00000605340 133 ntBASIC4.82□□□□□ -1.64
ATF4P18848 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 AC103705.1-201ENST00000619013 241 ntBASIC4.82□□□□□ -1.64
ATF4P18848 MIR6823-201ENST00000622118 61 ntBASIC4.82□□□□□ -1.64
ATF4P18848 MIR6806-201ENST00000622141 64 ntBASIC4.82□□□□□ -1.64
ATF4P18848 AC010325.3-201ENST00000641084 394 ntBASIC4.82□□□□□ -1.64
ATF4P18848 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATF4P18848 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ATF4P18848 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF4P18848 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ATF4P18848 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.81□□□□□ -1.64
ATF4P18848 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 UBE2L2-201ENST00000254302 429 ntBASIC4.81□□□□□ -1.64
ATF4P18848 RNA5SP52-201ENST00000362448 134 ntBASIC4.81□□□□□ -1.64
ATF4P18848 RNU6-715P-201ENST00000365204 103 ntBASIC4.81□□□□□ -1.64
ATF4P18848 Y_RNA.384-201ENST00000383909 102 ntBASIC4.81□□□□□ -1.64
ATF4P18848 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 MIR1271-201ENST00000408537 86 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 BTF3L4P3-201ENST00000418879 476 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AL139095.3-201ENST00000419672 1203 ntBASIC4.81□□□□□ -1.64
ATF4P18848 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AC099782.1-201ENST00000425889 474 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AL354707.3-201ENST00000427308 331 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.81□□□□□ -1.64
ATF4P18848 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
ATF4P18848 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AC234771.2-201ENST00000445718 597 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AL121877.1-201ENST00000453704 622 ntBASIC4.81□□□□□ -1.64
ATF4P18848 RPL12P39-201ENST00000455456 496 ntBASIC4.81□□□□□ -1.64
ATF4P18848 RANP2-201ENST00000456833 229 ntBASIC4.81□□□□□ -1.64
ATF4P18848 RPL31P13-201ENST00000484151 370 ntBASIC4.81□□□□□ -1.64
ATF4P18848 MTCO1P29-201ENST00000496868 288 ntBASIC4.81□□□□□ -1.64
ATF4P18848 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 RNU6-864P-201ENST00000516256 108 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.81□□□□□ -1.64
ATF4P18848 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.81□□□□□ -1.64
ATF4P18848 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 MIR5692A1-201ENST00000580523 69 ntBASIC4.81□□□□□ -1.64
ATF4P18848 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 CTHRC1P1-201ENST00000605383 469 ntBASIC4.81□□□□□ -1.64
ATF4P18848 MIR15A-201ENST00000607334 83 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AC068726.1-201ENST00000610993 341 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AL589743.6-201ENST00000611025 117 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AC089999.3-201ENST00000622440 577 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AC090574.1-201ENST00000623186 233 ntBASIC4.81□□□□□ -1.64
ATF4P18848 AP001052.1-201ENST00000626421 99 ntBASIC4.81□□□□□ -1.64
ATF4P18848 MTND1P37-201ENST00000636562 264 ntBASIC4.81□□□□□ -1.64
ATF4P18848 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms