Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC018630.1-201ENST00000541376 925 ntBASIC2.57□□□□□ -2
UPK1BO75841 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.57□□□□□ -2
UPK1BO75841 AL391156.1-201ENST00000554965 554 ntBASIC2.57□□□□□ -2
UPK1BO75841 SULT1C2P1-202ENST00000562418 459 ntBASIC2.57□□□□□ -2
UPK1BO75841 AC124283.4-201ENST00000581815 456 ntBASIC2.57□□□□□ -2
UPK1BO75841 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.57□□□□□ -2
UPK1BO75841 AC073657.2-201ENST00000605661 303 ntBASIC2.57□□□□□ -2
UPK1BO75841 RPL23AP88-201ENST00000605759 454 ntBASIC2.57□□□□□ -2
UPK1BO75841 AC106028.5-201ENST00000610332 395 ntBASIC2.57□□□□□ -2
UPK1BO75841 VN1R74P-201ENST00000613259 503 ntBASIC2.57□□□□□ -2
UPK1BO75841 AC006111.3-201ENST00000622137 383 ntBASIC2.57□□□□□ -2
UPK1BO75841 RNA5SP196-201ENST00000625967 102 ntBASIC2.57□□□□□ -2
UPK1BO75841 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.57□□□□□ -2
UPK1BO75841 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.57□□□□□ -2
UPK1BO75841 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.57□□□□□ -2
UPK1BO75841 MFSD8-245ENST00000641743 948 ntBASIC2.57□□□□□ -2
UPK1BO75841 ZNF663P-202ENST00000641770 1131 ntBASIC2.57□□□□□ -2
UPK1BO75841 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
UPK1BO75841 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPK1BO75841 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1BO75841 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.56□□□□□ -2
UPK1BO75841 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.56□□□□□ -2
UPK1BO75841 RNU6-839P-201ENST00000363347 108 ntBASIC2.56□□□□□ -2
UPK1BO75841 RPL22P22-201ENST00000395439 379 ntBASIC2.56□□□□□ -2
UPK1BO75841 CYB5AP4-201ENST00000396692 399 ntBASIC2.56□□□□□ -2
UPK1BO75841 CYCSP45-201ENST00000402289 315 ntBASIC2.56□□□□□ -2
UPK1BO75841 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.56□□□□□ -2
UPK1BO75841 BOLA3P4-201ENST00000418151 400 ntBASIC2.56□□□□□ -2
UPK1BO75841 AL513175.2-201ENST00000422071 443 ntBASIC2.56□□□□□ -2
UPK1BO75841 MTCO1P39-201ENST00000426148 480 ntBASIC2.56□□□□□ -2
UPK1BO75841 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.56□□□□□ -2
UPK1BO75841 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1BO75841 AC073387.1-201ENST00000453261 709 ntBASIC2.56□□□□□ -2
UPK1BO75841 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.56□□□□□ -2
UPK1BO75841 RPS7P7-201ENST00000463499 571 ntBASIC2.56□□□□□ -2
UPK1BO75841 RPS29P22-201ENST00000472363 168 ntBASIC2.56□□□□□ -2
UPK1BO75841 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.56□□□□□ -2
UPK1BO75841 AC068724.1-201ENST00000487100 792 ntBASIC2.56□□□□□ -2
UPK1BO75841 RPL21P13-201ENST00000488305 481 ntBASIC2.56□□□□□ -2
UPK1BO75841 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.56□□□□□ -2
UPK1BO75841 AC010460.1-201ENST00000507087 466 ntBASIC2.56□□□□□ -2
UPK1BO75841 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
UPK1BO75841 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.56□□□□□ -2
UPK1BO75841 AC239860.2-201ENST00000525886 270 ntBASIC2.56□□□□□ -2
UPK1BO75841 AP001317.1-201ENST00000531194 960 ntBASIC2.56□□□□□ -2
UPK1BO75841 AL133271.1-201ENST00000538229 291 ntBASIC2.56□□□□□ -2
UPK1BO75841 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.56□□□□□ -2
UPK1BO75841 MED28P6-201ENST00000558776 231 ntBASIC2.56□□□□□ -2
UPK1BO75841 AL160237.3-201ENST00000604114 1013 ntBASIC2.56□□□□□ -2
UPK1BO75841 AL021368.1-201ENST00000607490 540 ntBASIC2.56□□□□□ -2
UPK1BO75841 AC009570.1-201ENST00000609599 745 ntBASIC2.56□□□□□ -2
UPK1BO75841 AP005229.2-201ENST00000609980 697 ntBASIC2.56□□□□□ -2
UPK1BO75841 AC100793.4-201ENST00000613683 429 ntBASIC2.56□□□□□ -2
UPK1BO75841 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPK1BO75841 AL355493.4-201ENST00000618530 292 ntBASIC2.56□□□□□ -2
UPK1BO75841 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
UPK1BO75841 AC009039.2-201ENST00000624524 529 ntBASIC2.56□□□□□ -2
UPK1BO75841 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.56□□□□□ -2
UPK1BO75841 MTCO1P4-201ENST00000520516 1409 ntBASIC2.56□□□□□ -2
UPK1BO75841 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
UPK1BO75841 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.56□□□□□ -2
UPK1BO75841 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
UPK1BO75841 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.55□□□□□ -2
UPK1BO75841 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.55□□□□□ -2
UPK1BO75841 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
UPK1BO75841 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 RNU4-35P-201ENST00000362588 141 ntBASIC2.55□□□□□ -2
UPK1BO75841 RNU6-609P-201ENST00000365459 107 ntBASIC2.55□□□□□ -2
UPK1BO75841 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 CD24P4-201ENST00000382840 243 ntBASIC2.55□□□□□ -2
UPK1BO75841 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 RNU6-354P-201ENST00000383862 107 ntBASIC2.55□□□□□ -2
UPK1BO75841 RNU6-610P-201ENST00000384264 107 ntBASIC2.55□□□□□ -2
UPK1BO75841 MIR493-201ENST00000385254 89 ntBASIC2.55□□□□□ -2
UPK1BO75841 ARF4P3-201ENST00000397387 509 ntBASIC2.55□□□□□ -2
UPK1BO75841 RPL7P25-201ENST00000404151 721 ntBASIC2.55□□□□□ -2
UPK1BO75841 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.55□□□□□ -2
UPK1BO75841 RPL21P32-201ENST00000419877 477 ntBASIC2.55□□□□□ -2
UPK1BO75841 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.55□□□□□ -2
UPK1BO75841 USP9YP36-201ENST00000424581 829 ntBASIC2.55□□□□□ -2
UPK1BO75841 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.55□□□□□ -2
UPK1BO75841 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 UBE2D3P3-201ENST00000426992 425 ntBASIC2.55□□□□□ -2
UPK1BO75841 RAC1P8-201ENST00000427086 527 ntBASIC2.55□□□□□ -2
UPK1BO75841 BRWD1P3-201ENST00000428816 390 ntBASIC2.55□□□□□ -2
UPK1BO75841 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.55□□□□□ -2
UPK1BO75841 MTCYBP34-201ENST00000439552 670 ntBASIC2.55□□□□□ -2
UPK1BO75841 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.55□□□□□ -2
UPK1BO75841 COX6CP18-201ENST00000448769 222 ntBASIC2.55□□□□□ -2
UPK1BO75841 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.55□□□□□ -2
UPK1BO75841 AC104472.2-201ENST00000469035 601 ntBASIC2.55□□□□□ -2
UPK1BO75841 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.55□□□□□ -2
UPK1BO75841 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.55□□□□□ -2
UPK1BO75841 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms