Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL359740.1-201ENST00000624340 592 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AP005264.7-201ENST00000625003 745 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 MTCO1P24-201ENST00000515438 1558 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZIC3O60481 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC027290.2-201ENST00000623210 18662 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 SPRR2C-201ENST00000290702 219 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 MIR372-201ENST00000362225 67 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNY4P24-201ENST00000362735 96 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNU6-989P-201ENST00000362756 107 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 Y_RNA.234-201ENST00000364409 97 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNA5SP513-201ENST00000364648 118 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 RNU6-761P-201ENST00000384148 107 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 Y_RNA.517-201ENST00000384551 106 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 SNORD115.1-201ENST00000391109 76 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.7□□□□□ -1.82
ZIC3O60481 RNA5SP56-201ENST00000410277 118 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 Y_RNA.608-201ENST00000410647 95 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNU6-248P-201ENST00000410720 107 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 RPS12P5-201ENST00000423449 371 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
ZIC3O60481 HLA-N-201ENST00000437516 135 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 MTND1P34-201ENST00000438556 671 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RPL23AP33-201ENST00000442301 452 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 FAM103A2P-201ENST00000444122 354 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 HSFY6P-201ENST00000445573 403 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AL590399.6-201ENST00000446396 307 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 RPL7P52-201ENST00000449200 742 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 PDSS1P2-201ENST00000449397 678 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RPL36AP13-201ENST00000457490 317 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC011825.1-201ENST00000484967 388 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 LARP1BP2-201ENST00000486594 519 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC096751.1-202ENST00000502691 1067 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.7□□□□□ -1.82
ZIC3O60481 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.7□□□□□ -1.82
ZIC3O60481 RNU6-27P-201ENST00000516146 107 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNU7-143P-201ENST00000516781 65 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNU6-714P-201ENST00000516963 103 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 MIR2116-201ENST00000517221 80 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 MTND6P33-201ENST00000571794 183 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC090615.1-201ENST00000577519 154 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.7□□□□□ -1.82
ZIC3O60481 TPMTP1-201ENST00000592307 737 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC025165.5-201ENST00000602802 578 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AL355812.1-201ENST00000603215 216 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC067959.1-201ENST00000604334 379 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC115621.1-201ENST00000604653 858 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 AC004492.1-201ENST00000607036 742 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 RNU4-89P-201ENST00000607443 133 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC138932.5-201ENST00000617759 563 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC099842.1-201ENST00000619919 596 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC008785.1-201ENST00000624475 456 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 AC091925.2-201ENST00000625059 256 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.7□□□□□ -1.82
ZIC3O60481 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.7□□□□□ -1.82
ZIC3O60481 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
ZIC3O60481 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 AC007390.2-201ENST00000606229 3803 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZIC3O60481 AC090229.1-201ENST00000590983 1609 ntBASIC3.7□□□□□ -1.82
ZIC3O60481 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.69□□□□□ -1.82
ZIC3O60481 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.69□□□□□ -1.82
ZIC3O60481 NMD3P1-201ENST00000439704 1488 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZIC3O60481 RNA5SP258-201ENST00000362750 119 ntBASIC3.69□□□□□ -1.82
ZIC3O60481 RNU6-853P-201ENST00000364306 107 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms