Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.54□□□□□ -1.36
ACTN4O43707 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ACTN4O43707 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ACTN4O43707 AC004076.2-201ENST00000620532 3323 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ACTN4O43707 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ACTN4O43707 RNY1P16-201ENST00000363063 111 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 SNORD82-201ENST00000365530 70 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 RNU6-1226P-201ENST00000384317 107 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 RNA5SP178-201ENST00000410380 128 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 RN7SKP159-201ENST00000410657 292 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.54□□□□□ -1.36
ACTN4O43707 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.54□□□□□ -1.36
ACTN4O43707 PRUNEP1-201ENST00000425846 705 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 RPL35AP22-201ENST00000436855 335 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.54□□□□□ -1.36
ACTN4O43707 AC018437.1-201ENST00000492214 406 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ACTN4O43707 RNU6-1278P-201ENST00000516130 107 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 Y_RNA.683-201ENST00000516508 93 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.54□□□□□ -1.36
ACTN4O43707 AC009643.1-201ENST00000532030 391 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 AP002392.1-201ENST00000537692 208 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.54□□□□□ -1.36
ACTN4O43707 AL136131.3-201ENST00000607600 188 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 AL589994.2-201ENST00000621124 579 ntBASIC6.54□□□□□ -1.36
ACTN4O43707 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.54□□□□□ -1.36
ACTN4O43707 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ACTN4O43707 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
ACTN4O43707 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ACTN4O43707 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.53□□□□□ -1.36
ACTN4O43707 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
ACTN4O43707 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.53□□□□□ -1.36
ACTN4O43707 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 RNU6-704P-201ENST00000364162 103 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 RNU6-1078P-201ENST00000364522 103 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 RN7SKP186-201ENST00000365371 303 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 MIR628-201ENST00000385229 95 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC016739.1-201ENST00000405359 345 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.53□□□□□ -1.36
ACTN4O43707 AL358176.3-201ENST00000420757 454 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC023141.8-201ENST00000442554 208 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 RPL29P29-201ENST00000448725 423 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AL353691.1-201ENST00000451332 387 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.53□□□□□ -1.36
ACTN4O43707 RPS27AP1-201ENST00000475545 471 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC110792.1-201ENST00000491826 472 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.53□□□□□ -1.36
ACTN4O43707 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.53□□□□□ -1.36
ACTN4O43707 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.53□□□□□ -1.36
ACTN4O43707 AC107393.1-201ENST00000512403 346 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 RN7SKP238-201ENST00000516483 249 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC034114.1-201ENST00000520293 285 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 WBP1LP3-201ENST00000523033 208 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.53□□□□□ -1.36
ACTN4O43707 DEFB108E-201ENST00000524692 240 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.53□□□□□ -1.36
ACTN4O43707 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
ACTN4O43707 AC063949.1-201ENST00000552900 865 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.53□□□□□ -1.36
ACTN4O43707 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.53□□□□□ -1.36
ACTN4O43707 MIR4502-201ENST00000580432 81 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ACTN4O43707 AC006023.2-201ENST00000609916 167 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 AL139099.4-201ENST00000614802 114 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.53□□□□□ -1.36
ACTN4O43707 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.53□□□□□ -1.36
ACTN4O43707 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 AC015799.1-201ENST00000622996 3122 ntBASIC6.53□□□□□ -1.36
ACTN4O43707 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ACTN4O43707 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
ACTN4O43707 AC004656.1-201ENST00000568479 4951 ntBASIC6.52□□□□□ -1.36
ACTN4O43707 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ACTN4O43707 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ACTN4O43707 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ACTN4O43707 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ACTN4O43707 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ACTN4O43707 RNA5SP232-201ENST00000364144 119 ntBASIC6.52□□□□□ -1.37
ACTN4O43707 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.52□□□□□ -1.37
ACTN4O43707 RNU6-174P-201ENST00000410406 106 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms