Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 AL158211.5-201ENST00000623583 2518 ntBASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
DNMT3AQ9Y6K1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 CRYGFP-201ENST00000418459 633 ntBASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 Z82202.1-201ENST00000623446 1880 ntBASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 KRT8P11-201ENST00000409686 1436 ntBASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DNMT3AQ9Y6K1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 MFAP1P1-201ENST00000442257 1255 ntBASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
DNMT3AQ9Y6K1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 CA15P1-201ENST00000481698 905 ntBASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3AQ9Y6K1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 AC087499.1-201ENST00000418141 1075 ntBASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 TSPY23P-201ENST00000440136 739 ntBASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.78■□□□□ 0.6
DNMT3AQ9Y6K1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.77■□□□□ 0.6
DNMT3AQ9Y6K1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3AQ9Y6K1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms