Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 AC092720.2-201ENST00000602388 1665 ntBASIC21.69■■□□□ 1.06
PTCH2Q9Y6C5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 AL590627.1-203ENST00000421194 1026 ntBASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 TSPY12P-201ENST00000421279 868 ntBASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 TSPY22P-201ENST00000427496 604 ntBASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCH2Q9Y6C5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 KRT16P4-201ENST00000453883 522 ntBASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 TOB2P1-201ENST00000469761 992 ntBASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 AC012615.1-201ENST00000565797 1299 ntBASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 AC079602.3-201ENST00000623931 403 ntBASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.67■■□□□ 1.06
PTCH2Q9Y6C5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCH2Q9Y6C5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 PMS2P1-201ENST00000431037 1228 ntBASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AF228730.7-201ENST00000641842 219 ntBASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTCH2Q9Y6C5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PTCH2Q9Y6C5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.64■■□□□ 1.06
PTCH2Q9Y6C5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTCH2Q9Y6C5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.64■■□□□ 1.06
PTCH2Q9Y6C5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTCH2Q9Y6C5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
PTCH2Q9Y6C5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 MIR574-201ENST00000385209 96 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms