Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 AC097658.1-201ENST00000475555 843 ntBASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 AL356652.1-201ENST00000615962 565 ntBASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 WIZP1-201ENST00000531444 2299 ntBASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.4■□□□□ 0.54
AP4B1Q9Y6B7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.39■□□□□ 0.54
AP4B1Q9Y6B7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 AL161938.1-201ENST00000569833 2180 ntBASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4B1Q9Y6B7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 DUSP5P2-201ENST00000426873 1033 ntBASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 AC091874.3-201ENST00000512672 1195 ntBASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
AP4B1Q9Y6B7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 AC098934.4-201ENST00000564127 592 ntBASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 MYC-209ENST00000641252 345 ntBASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4B1Q9Y6B7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP4B1Q9Y6B7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms