Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN10AQ9Y5Y9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 HLA-F-220ENST00000434407 884 ntBASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.05■□□□□ 0.96
SCN10AQ9Y5Y9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCN10AQ9Y5Y9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN10AQ9Y5Y9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 AC093525.10-201ENST00000625130 1569 ntBASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN10AQ9Y5Y9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.02■□□□□ 0.95
SCN10AQ9Y5Y9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SCN10AQ9Y5Y9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 AL137060.1-201ENST00000618151 2648 ntBASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms