Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA11Q9Y5H2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 AC141586.3-201ENST00000562166 1838 ntBASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA11Q9Y5H2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 AC120498.9-201ENST00000339021 3867 ntBASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 LINC01465-201ENST00000408887 1940 ntBASIC18.59■□□□□ 0.57
PCDHGA11Q9Y5H2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA11Q9Y5H2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGA11Q9Y5H2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA11Q9Y5H2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA11Q9Y5H2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA11Q9Y5H2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA11Q9Y5H2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA11Q9Y5H2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 SDHAP1-207ENST00000440850 2000 ntBASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 TEX21P-204ENST00000641479 1693 ntBASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 AC239809.2-201ENST00000415381 517 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms