Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 AC069544.1-201ENST00000609399 999 ntBASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB3Q9Y5G1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AC124283.5-201ENST00000624661 1809 ntBASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 YBX1P10-201ENST00000444752 975 ntBASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 RPPH1-201ENST00000516869 333 ntBASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB3Q9Y5G1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms