Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.27■□□□□ 0.68
PKP3Q9Y446 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP3Q9Y446 CR392000.1-201ENST00000624770 1228 ntBASIC19.27■□□□□ 0.68
PKP3Q9Y446 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP3Q9Y446 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP3Q9Y446 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PKP3Q9Y446 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PKP3Q9Y446 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PKP3Q9Y446 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
PKP3Q9Y446 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PKP3Q9Y446 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.26■□□□□ 0.67
PKP3Q9Y446 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 HCG11-201ENST00000411553 5696 ntBASIC19.26■□□□□ 0.67
PKP3Q9Y446 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.26■□□□□ 0.67
PKP3Q9Y446 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PKP3Q9Y446 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 AC012618.2-201ENST00000428058 849 ntBASIC19.26■□□□□ 0.67
PKP3Q9Y446 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PKP3Q9Y446 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.26■□□□□ 0.67
PKP3Q9Y446 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP3Q9Y446 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 MIR718-201ENST00000390190 70 ntBASIC19.25■□□□□ 0.67
PKP3Q9Y446 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 AL031985.4-201ENST00000642138 673 ntBASIC19.25■□□□□ 0.67
PKP3Q9Y446 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PKP3Q9Y446 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKP3Q9Y446 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.24■□□□□ 0.67
PKP3Q9Y446 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 AC004980.1-204ENST00000429707 299 ntBASIC19.24■□□□□ 0.67
PKP3Q9Y446 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.24■□□□□ 0.67
PKP3Q9Y446 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 AC233702.5-201ENST00000584107 538 ntBASIC19.24■□□□□ 0.67
PKP3Q9Y446 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP3Q9Y446 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP3Q9Y446 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP3Q9Y446 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP3Q9Y446 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP3Q9Y446 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.23■□□□□ 0.67
PKP3Q9Y446 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PKP3Q9Y446 FAM197Y1-201ENST00000421178 764 ntBASIC19.23■□□□□ 0.67
PKP3Q9Y446 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms