Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 AL160286.2-201ENST00000567150 934 ntBASIC19.35■□□□□ 0.69
MBD1Q9UIS9 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 AL121956.5-201ENST00000625261 221 ntBASIC19.35■□□□□ 0.69
MBD1Q9UIS9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD1Q9UIS9 TREX1-205ENST00000625293 1783 ntBASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.34■□□□□ 0.69
MBD1Q9UIS9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 AL441883.1-201ENST00000566170 1045 ntBASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD1Q9UIS9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 LINC01465-201ENST00000408887 1940 ntBASIC19.33■□□□□ 0.69
MBD1Q9UIS9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MBD1Q9UIS9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.33■□□□□ 0.68
MBD1Q9UIS9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 AL023973.1-201ENST00000624619 620 ntBASIC19.33■□□□□ 0.68
MBD1Q9UIS9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD1Q9UIS9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 AL359075.1-203ENST00000462729 1002 ntBASIC19.32■□□□□ 0.68
MBD1Q9UIS9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 PKD1P6-201ENST00000343738 4769 ntBASIC19.32■□□□□ 0.68
MBD1Q9UIS9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD1Q9UIS9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 HOMER2P1-201ENST00000455653 964 ntBASIC19.31■□□□□ 0.68
MBD1Q9UIS9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 KRT126P-201ENST00000549467 1181 ntBASIC19.31■□□□□ 0.68
MBD1Q9UIS9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 AL031432.5-201ENST00000641059 760 ntBASIC19.31■□□□□ 0.68
MBD1Q9UIS9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD1Q9UIS9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms