Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.61■□□□□ 0.41
LRFN1Q9P244 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRFN1Q9P244 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 AC007663.1-201ENST00000438948 1240 ntBASIC17.6■□□□□ 0.41
LRFN1Q9P244 CA15P1-201ENST00000481698 905 ntBASIC17.6■□□□□ 0.41
LRFN1Q9P244 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 AL445228.2-201ENST00000605589 952 ntBASIC17.6■□□□□ 0.41
LRFN1Q9P244 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 AC073130.3-201ENST00000624389 2278 ntBASIC17.6■□□□□ 0.41
LRFN1Q9P244 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN1Q9P244 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRFN1Q9P244 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 AC104417.2-201ENST00000562989 1793 ntBASIC17.59■□□□□ 0.41
LRFN1Q9P244 ZNF815P-204ENST00000434898 1737 ntBASIC17.59■□□□□ 0.41
LRFN1Q9P244 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 PRSS44-201ENST00000515154 1146 ntBASIC17.59■□□□□ 0.41
LRFN1Q9P244 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRFN1Q9P244 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.59■□□□□ 0.41
LRFN1Q9P244 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LRFN1Q9P244 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.58■□□□□ 0.41
LRFN1Q9P244 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
LRFN1Q9P244 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.58■□□□□ 0.41
LRFN1Q9P244 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRFN1Q9P244 AC092338.2-201ENST00000568827 1415 ntBASIC17.58■□□□□ 0.41
LRFN1Q9P244 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LRFN1Q9P244 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 AC104076.2-201ENST00000448912 469 ntBASIC17.58■□□□□ 0.4
LRFN1Q9P244 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 KRT18P35-201ENST00000510488 1269 ntBASIC17.58■□□□□ 0.4
LRFN1Q9P244 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 AL353719.1-201ENST00000566847 864 ntBASIC17.58■□□□□ 0.4
LRFN1Q9P244 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 AL023803.3-201ENST00000615559 522 ntBASIC17.58■□□□□ 0.4
LRFN1Q9P244 RNF165-205ENST00000588679 2904 ntBASIC17.58■□□□□ 0.4
LRFN1Q9P244 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRFN1Q9P244 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
LRFN1Q9P244 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 KRT8P11-201ENST00000409686 1436 ntBASIC17.57■□□□□ 0.4
LRFN1Q9P244 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 ARMC10P1-201ENST00000313754 855 ntBASIC17.57■□□□□ 0.4
LRFN1Q9P244 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms