Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 KRT18P16-201ENST00000510337 1294 ntBASIC19.79■□□□□ 0.76
VPS45Q9NRW7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 WWOX-216ENST00000569818 525 ntBASIC19.79■□□□□ 0.76
VPS45Q9NRW7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS45Q9NRW7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 AC010203.1-204ENST00000548782 407 ntBASIC19.78■□□□□ 0.76
VPS45Q9NRW7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS45Q9NRW7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 C2orf69P3-201ENST00000565542 1120 ntBASIC19.77■□□□□ 0.76
VPS45Q9NRW7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.77■□□□□ 0.76
VPS45Q9NRW7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.77■□□□□ 0.76
VPS45Q9NRW7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
VPS45Q9NRW7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VPS45Q9NRW7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VPS45Q9NRW7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
VPS45Q9NRW7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 KRT8P8-201ENST00000434750 1448 ntBASIC19.76■□□□□ 0.75
VPS45Q9NRW7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 TUBB8P6-201ENST00000436895 1288 ntBASIC19.76■□□□□ 0.75
VPS45Q9NRW7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 LINC01238-205ENST00000567549 1107 ntBASIC19.76■□□□□ 0.75
VPS45Q9NRW7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 AC091076.1-201ENST00000610741 619 ntBASIC19.76■□□□□ 0.75
VPS45Q9NRW7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms