Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF41Q9H4P4 AC007952.6-201ENST00000573168 2673 ntBASIC22.65■■□□□ 1.22
RNF41Q9H4P4 AC003957.1-201ENST00000625108 2673 ntBASIC22.65■■□□□ 1.22
RNF41Q9H4P4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
RNF41Q9H4P4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 CRYGFP-201ENST00000418459 633 ntBASIC22.64■■□□□ 1.21
RNF41Q9H4P4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 CKBP1-201ENST00000565489 1086 ntBASIC22.64■■□□□ 1.21
RNF41Q9H4P4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF41Q9H4P4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 TEX21P-204ENST00000641479 1693 ntBASIC22.63■■□□□ 1.21
RNF41Q9H4P4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 MIR1238-201ENST00000408483 83 ntBASIC22.63■■□□□ 1.21
RNF41Q9H4P4 MFAP1P1-201ENST00000442257 1255 ntBASIC22.63■■□□□ 1.21
RNF41Q9H4P4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.63■■□□□ 1.21
RNF41Q9H4P4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 AC141586.3-201ENST00000562166 1838 ntBASIC22.62■■□□□ 1.21
RNF41Q9H4P4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 MMP23A-201ENST00000234610 1017 ntBASIC22.62■■□□□ 1.21
RNF41Q9H4P4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.62■■□□□ 1.21
RNF41Q9H4P4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF41Q9H4P4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 AC005332.7-201ENST00000614046 2005 ntBASIC22.61■■□□□ 1.21
RNF41Q9H4P4 AC073912.3-201ENST00000624414 853 ntBASIC22.61■■□□□ 1.21
RNF41Q9H4P4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF41Q9H4P4 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.6■■□□□ 1.21
RNF41Q9H4P4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.6■■□□□ 1.21
RNF41Q9H4P4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF41Q9H4P4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF41Q9H4P4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RNF41Q9H4P4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF41Q9H4P4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
RNF41Q9H4P4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms