Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 AL023973.1-201ENST00000624619 620 ntBASIC20.02■□□□□ 0.8
LRRC3Q9BY71 AL031432.5-201ENST00000641059 760 ntBASIC20.02■□□□□ 0.8
LRRC3Q9BY71 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC3Q9BY71 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC3Q9BY71 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC3Q9BY71 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC3Q9BY71 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.01■□□□□ 0.79
LRRC3Q9BY71 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 ZNF815P-204ENST00000434898 1737 ntBASIC20.01■□□□□ 0.79
LRRC3Q9BY71 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRRC3Q9BY71 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LRRC3Q9BY71 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20■□□□□ 0.79
LRRC3Q9BY71 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20■□□□□ 0.79
LRRC3Q9BY71 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20■□□□□ 0.79
LRRC3Q9BY71 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20■□□□□ 0.79
LRRC3Q9BY71 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20■□□□□ 0.79
LRRC3Q9BY71 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20■□□□□ 0.79
LRRC3Q9BY71 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20■□□□□ 0.79
LRRC3Q9BY71 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC3Q9BY71 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.99■□□□□ 0.79
LRRC3Q9BY71 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 MIR4674-201ENST00000582457 87 ntBASIC19.99■□□□□ 0.79
LRRC3Q9BY71 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC3Q9BY71 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.99■□□□□ 0.79
LRRC3Q9BY71 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms