Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CPNE1Q99829 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE1Q99829 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE1Q99829 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE1Q99829 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CPNE1Q99829 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE1Q99829 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CPNE1Q99829 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CPNE1Q99829 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE1Q99829 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.18■□□□□ 0.66
CPNE1Q99829 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.18■□□□□ 0.66
CPNE1Q99829 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE1Q99829 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.18■□□□□ 0.66
CPNE1Q99829 AC133041.1-202ENST00000642053 222 ntBASIC19.18■□□□□ 0.66
CPNE1Q99829 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPNE1Q99829 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CPNE1Q99829 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE1Q99829 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE1Q99829 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE1Q99829 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE1Q99829 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE1Q99829 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE1Q99829 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.17■□□□□ 0.66
CPNE1Q99829 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.17■□□□□ 0.66
CPNE1Q99829 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE1Q99829 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE1Q99829 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPNE1Q99829 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CPNE1Q99829 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE1Q99829 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE1Q99829 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CPNE1Q99829 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE1Q99829 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE1Q99829 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE1Q99829 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE1Q99829 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE1Q99829 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CPNE1Q99829 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE1Q99829 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.16■□□□□ 0.66
CPNE1Q99829 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CPNE1Q99829 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE1Q99829 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE1Q99829 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE1Q99829 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
CPNE1Q99829 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE1Q99829 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE1Q99829 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE1Q99829 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE1Q99829 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 AL512353.2-201ENST00000448759 1962 ntBASIC19.15■□□□□ 0.66
CPNE1Q99829 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE1Q99829 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 AC069152.1-201ENST00000438030 544 ntBASIC19.15■□□□□ 0.66
CPNE1Q99829 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms