Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR3917-201ENST00000580971 93 ntBASIC25.61■■□□□ 1.69
ABCA3Q99758 AL121912.1-201ENST00000603683 238 ntBASIC25.61■■□□□ 1.69
ABCA3Q99758 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ABCA3Q99758 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ABCA3Q99758 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.61■■□□□ 1.69
ABCA3Q99758 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ABCA3Q99758 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.61■■□□□ 1.69
ABCA3Q99758 AC104417.2-201ENST00000562989 1793 ntBASIC25.61■■□□□ 1.69
ABCA3Q99758 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
ABCA3Q99758 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ABCA3Q99758 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.6■■□□□ 1.69
ABCA3Q99758 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.6■■□□□ 1.69
ABCA3Q99758 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ABCA3Q99758 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC25.6■■□□□ 1.69
ABCA3Q99758 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.6■■□□□ 1.69
ABCA3Q99758 AC104819.1-201ENST00000504587 486 ntBASIC25.6■■□□□ 1.69
ABCA3Q99758 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ABCA3Q99758 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC25.6■■□□□ 1.69
ABCA3Q99758 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ABCA3Q99758 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.6■■□□□ 1.69
ABCA3Q99758 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.6■■□□□ 1.69
ABCA3Q99758 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ABCA3Q99758 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.6■■□□□ 1.69
ABCA3Q99758 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC25.6■■□□□ 1.69
ABCA3Q99758 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
ABCA3Q99758 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC25.6■■□□□ 1.69
ABCA3Q99758 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC25.6■■□□□ 1.69
ABCA3Q99758 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.59■■□□□ 1.69
ABCA3Q99758 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
ABCA3Q99758 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ABCA3Q99758 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.59■■□□□ 1.69
ABCA3Q99758 MIR662-201ENST00000384847 95 ntBASIC25.59■■□□□ 1.69
ABCA3Q99758 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ABCA3Q99758 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.59■■□□□ 1.69
ABCA3Q99758 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.59■■□□□ 1.69
ABCA3Q99758 IL11-204ENST00000590625 1028 ntTSL 2 BASIC25.59■■□□□ 1.69
ABCA3Q99758 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
ABCA3Q99758 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ABCA3Q99758 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ABCA3Q99758 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
ABCA3Q99758 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.59■■□□□ 1.69
ABCA3Q99758 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ABCA3Q99758 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.58■■□□□ 1.69
ABCA3Q99758 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
ABCA3Q99758 PMS2P1-201ENST00000431037 1228 ntBASIC25.58■■□□□ 1.69
ABCA3Q99758 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC25.58■■□□□ 1.69
ABCA3Q99758 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC25.58■■□□□ 1.69
ABCA3Q99758 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.58■■□□□ 1.69
ABCA3Q99758 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC25.58■■□□□ 1.69
ABCA3Q99758 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
ABCA3Q99758 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ABCA3Q99758 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.58■■□□□ 1.69
ABCA3Q99758 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ABCA3Q99758 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ABCA3Q99758 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
ABCA3Q99758 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC25.57■■□□□ 1.68
ABCA3Q99758 BET1L-206ENST00000486280 665 ntTSL 3 BASIC25.57■■□□□ 1.68
ABCA3Q99758 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.57■■□□□ 1.68
ABCA3Q99758 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
ABCA3Q99758 MIR7706-201ENST00000613747 67 ntBASIC25.57■■□□□ 1.68
ABCA3Q99758 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.57■■□□□ 1.68
ABCA3Q99758 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ABCA3Q99758 AC233702.3-201ENST00000578656 1387 ntBASIC25.56■■□□□ 1.68
ABCA3Q99758 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
ABCA3Q99758 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCA3Q99758 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ABCA3Q99758 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCA3Q99758 SAPCD2P3-201ENST00000455031 850 ntBASIC25.56■■□□□ 1.68
ABCA3Q99758 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC25.56■■□□□ 1.68
ABCA3Q99758 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ABCA3Q99758 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.56■■□□□ 1.68
ABCA3Q99758 AC139530.3-201ENST00000620344 690 ntBASIC25.56■■□□□ 1.68
ABCA3Q99758 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ABCA3Q99758 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
ABCA3Q99758 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ABCA3Q99758 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ABCA3Q99758 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.55■■□□□ 1.68
ABCA3Q99758 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.55■■□□□ 1.68
ABCA3Q99758 TEX30-205ENST00000376029 959 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ABCA3Q99758 SLC25A1P1-201ENST00000528351 927 ntBASIC25.55■■□□□ 1.68
ABCA3Q99758 AL121772.3-201ENST00000610840 674 ntBASIC25.55■■□□□ 1.68
ABCA3Q99758 EP400NL-214ENST00000641289 2402 ntBASIC25.55■■□□□ 1.68
ABCA3Q99758 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.55■■□□□ 1.68
ABCA3Q99758 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
ABCA3Q99758 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms