Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.68■□□□□ 0.58
PKP4Q99569 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PKP4Q99569 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PKP4Q99569 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PKP4Q99569 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PKP4Q99569 AC012618.2-201ENST00000428058 849 ntBASIC18.68■□□□□ 0.58
PKP4Q99569 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP4Q99569 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 AC008550.1-201ENST00000511500 884 ntBASIC18.68■□□□□ 0.58
PKP4Q99569 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
PKP4Q99569 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.68■□□□□ 0.58
PKP4Q99569 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 CD177P1-201ENST00000606252 935 ntBASIC18.68■□□□□ 0.58
PKP4Q99569 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP4Q99569 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP4Q99569 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP4Q99569 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PKP4Q99569 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.68■□□□□ 0.58
PKP4Q99569 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.68■□□□□ 0.58
PKP4Q99569 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.68■□□□□ 0.58
PKP4Q99569 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP4Q99569 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PKP4Q99569 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP4Q99569 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PKP4Q99569 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP4Q99569 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.67■□□□□ 0.58
PKP4Q99569 AC113410.3-201ENST00000623366 203 ntBASIC18.67■□□□□ 0.58
PKP4Q99569 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 AL049637.2-201ENST00000641778 930 ntBASIC18.67■□□□□ 0.58
PKP4Q99569 AL031985.4-201ENST00000642138 673 ntBASIC18.67■□□□□ 0.58
PKP4Q99569 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP4Q99569 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.67■□□□□ 0.58
PKP4Q99569 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PKP4Q99569 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PKP4Q99569 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP4Q99569 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP4Q99569 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.66■□□□□ 0.58
PKP4Q99569 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.66■□□□□ 0.58
PKP4Q99569 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.66■□□□□ 0.58
PKP4Q99569 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP4Q99569 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.66■□□□□ 0.58
PKP4Q99569 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP4Q99569 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.66■□□□□ 0.58
PKP4Q99569 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 AC087289.5-201ENST00000586076 3175 ntBASIC18.66■□□□□ 0.58
PKP4Q99569 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
PKP4Q99569 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PKP4Q99569 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP4Q99569 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PKP4Q99569 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PKP4Q99569 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.65■□□□□ 0.58
PKP4Q99569 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP4Q99569 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms