Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 AL121912.1-201ENST00000603683 238 ntBASIC19.39■□□□□ 0.69
PHOX2BQ99453 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.39■□□□□ 0.69
PHOX2BQ99453 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHOX2BQ99453 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 PMS2P2-201ENST00000425039 1128 ntBASIC19.38■□□□□ 0.69
PHOX2BQ99453 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 FEM1AP4-201ENST00000443167 1987 ntBASIC19.38■□□□□ 0.69
PHOX2BQ99453 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 KRT18P31-201ENST00000506277 1292 ntBASIC19.38■□□□□ 0.69
PHOX2BQ99453 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.38■□□□□ 0.69
PHOX2BQ99453 AL121772.3-201ENST00000610840 674 ntBASIC19.38■□□□□ 0.69
PHOX2BQ99453 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHOX2BQ99453 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHOX2BQ99453 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHOX2BQ99453 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHOX2BQ99453 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHOX2BQ99453 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHOX2BQ99453 AP000523.1-201ENST00000398242 1049 ntBASIC19.37■□□□□ 0.69
PHOX2BQ99453 AC092597.1-201ENST00000487352 616 ntBASIC19.37■□□□□ 0.69
PHOX2BQ99453 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHOX2BQ99453 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHOX2BQ99453 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AC005104.2-201ENST00000427818 678 ntBASIC19.36■□□□□ 0.69
PHOX2BQ99453 KRT16P4-201ENST00000453883 522 ntBASIC19.36■□□□□ 0.69
PHOX2BQ99453 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AL691403.2-201ENST00000618460 490 ntBASIC19.36■□□□□ 0.69
PHOX2BQ99453 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PHOX2BQ99453 AL391422.3-201ENST00000603791 2761 ntBASIC19.36■□□□□ 0.69
PHOX2BQ99453 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHOX2BQ99453 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 HLA-G-202ENST00000376815 851 ntBASIC19.35■□□□□ 0.69
PHOX2BQ99453 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHOX2BQ99453 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 BX842568.4-201ENST00000421222 227 ntBASIC19.35■□□□□ 0.69
PHOX2BQ99453 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 RASA4DP-201ENST00000460726 1199 ntBASIC19.35■□□□□ 0.69
PHOX2BQ99453 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.35■□□□□ 0.69
PHOX2BQ99453 KRT18P58-201ENST00000527480 1120 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms