Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H2AAQ96QV6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
HIST1H2AAQ96QV6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H2AAQ96QV6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HIST1H2AAQ96QV6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST1H2AAQ96QV6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST1H2AAQ96QV6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 AP003097.1-201ENST00000530657 1135 ntBASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 AC004264.1-201ENST00000608354 794 ntBASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST1H2AAQ96QV6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 ZNF815P-204ENST00000434898 1737 ntBASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 AC087289.5-201ENST00000586076 3175 ntBASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST1H2AAQ96QV6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 KRT18P16-201ENST00000510337 1294 ntBASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H2AAQ96QV6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms