Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 AC116351.2-201ENST00000606540 1585 ntBASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 AC243591.1-201ENST00000452967 1364 ntBASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD1Q96PZ7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 CLDN5-201ENST00000403084 2357 ntBASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 AL353801.3-201ENST00000609898 542 ntBASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 HLA-G-202ENST00000376815 851 ntBASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 HLA-G-203ENST00000376818 1127 ntBASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 PGAM5P1-201ENST00000518923 814 ntBASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 AP001160.2-201ENST00000596071 487 ntBASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.34■□□□□ 0.21
CSMD1Q96PZ7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.33■□□□□ 0.21
CSMD1Q96PZ7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 AC244015.2-201ENST00000616358 1861 ntBASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CSMD1Q96PZ7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 KRT18P58-201ENST00000527480 1120 ntBASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD1Q96PZ7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms