Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 TSPY5P-201ENST00000426936 936 ntBASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC85AQ96PX6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC85AQ96PX6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.83■■□□□ 1.4
CCDC85AQ96PX6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 CA15P1-201ENST00000481698 905 ntBASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 AL441883.1-201ENST00000566170 1045 ntBASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC85AQ96PX6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 LINC01521-201ENST00000504184 1943 ntBASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC85AQ96PX6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 AC092647.4-201ENST00000457211 535 ntBASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 MIR4674-201ENST00000582457 87 ntBASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 AL358472.4-201ENST00000633140 710 ntBASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC85AQ96PX6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms