Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX3Q96PT4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.93□□□□□ -0.02
DUX3Q96PT4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX3Q96PT4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 AC004951.3-201ENST00000418645 1148 ntBASIC14.92□□□□□ -0.02
DUX3Q96PT4 TMPOP1-202ENST00000424642 1267 ntBASIC14.92□□□□□ -0.02
DUX3Q96PT4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 KRT18P57-201ENST00000443599 1254 ntBASIC14.92□□□□□ -0.02
DUX3Q96PT4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 AC145285.6-201ENST00000604632 637 ntBASIC14.92□□□□□ -0.02
DUX3Q96PT4 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.92□□□□□ -0.02
DUX3Q96PT4 AC005363.2-201ENST00000618631 242 ntBASIC14.92□□□□□ -0.02
DUX3Q96PT4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
DUX3Q96PT4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX3Q96PT4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.91□□□□□ -0.02
DUX3Q96PT4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 AC009237.14-201ENST00000609975 1594 ntBASIC14.91□□□□□ -0.02
DUX3Q96PT4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 AC005521.1-201ENST00000393351 872 ntBASIC14.91□□□□□ -0.02
DUX3Q96PT4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DUX3Q96PT4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.91□□□□□ -0.02
DUX3Q96PT4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms