Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 AC079598.2-202ENST00000546624 1451 ntBASIC14.48□□□□□ -0.09
AP1S3Q96PC3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 RBM17P2-201ENST00000616397 1405 ntBASIC14.48□□□□□ -0.09
AP1S3Q96PC3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S3Q96PC3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 LINC02228-203ENST00000641970 1355 ntBASIC14.47□□□□□ -0.09
AP1S3Q96PC3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S3Q96PC3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 AC027612.3-201ENST00000413684 1047 ntBASIC14.46□□□□□ -0.09
AP1S3Q96PC3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 AC110285.6-201ENST00000617652 491 ntBASIC14.46□□□□□ -0.09
AP1S3Q96PC3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S3Q96PC3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP1S3Q96PC3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.46□□□□□ -0.1
AP1S3Q96PC3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
AP1S3Q96PC3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
AP1S3Q96PC3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.46□□□□□ -0.1
AP1S3Q96PC3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms