Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 KRT8P26-201ENST00000534154 1276 ntBASIC18.84■□□□□ 0.61
CFAP54Q96N23 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 AC134684.3-201ENST00000641758 218 ntBASIC18.84■□□□□ 0.61
CFAP54Q96N23 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 AC116351.2-201ENST00000606540 1585 ntBASIC18.84■□□□□ 0.61
CFAP54Q96N23 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 CYMP-203ENST00000474680 1263 ntBASIC18.84■□□□□ 0.61
CFAP54Q96N23 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 HLA-A-209ENST00000638375 975 ntBASIC18.84■□□□□ 0.61
CFAP54Q96N23 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CFAP54Q96N23 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.83■□□□□ 0.61
CFAP54Q96N23 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.83■□□□□ 0.61
CFAP54Q96N23 AC139887.3-201ENST00000568585 713 ntBASIC18.83■□□□□ 0.61
CFAP54Q96N23 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CFAP54Q96N23 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CFAP54Q96N23 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 FEM1AP4-201ENST00000443167 1987 ntBASIC18.83■□□□□ 0.6
CFAP54Q96N23 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
CFAP54Q96N23 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CFAP54Q96N23 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 RFPL4AP1-201ENST00000530883 850 ntBASIC18.82■□□□□ 0.6
CFAP54Q96N23 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 ECEL1P1-201ENST00000373592 1742 ntBASIC18.82■□□□□ 0.6
CFAP54Q96N23 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 AC034232.1-201ENST00000506026 1064 ntBASIC18.82■□□□□ 0.6
CFAP54Q96N23 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 HLA-F-220ENST00000434407 884 ntBASIC18.82■□□□□ 0.6
CFAP54Q96N23 AC104819.1-201ENST00000504587 486 ntBASIC18.82■□□□□ 0.6
CFAP54Q96N23 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.82■□□□□ 0.6
CFAP54Q96N23 LINC01711-201ENST00000598340 967 ntBASIC18.82■□□□□ 0.6
CFAP54Q96N23 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CFAP54Q96N23 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
CFAP54Q96N23 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 AC112907.3-201ENST00000577781 2400 ntBASIC18.81■□□□□ 0.6
CFAP54Q96N23 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CFAP54Q96N23 UPF3AP3-201ENST00000420996 769 ntBASIC18.81■□□□□ 0.6
CFAP54Q96N23 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms