Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf72Q96LT7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 AC008687.6-201ENST00000596318 630 ntBASIC19.74■□□□□ 0.75
C9orf72Q96LT7 HLA-B-256ENST00000639848 1089 ntBASIC19.74■□□□□ 0.75
C9orf72Q96LT7 AC066615.1-201ENST00000640911 628 ntBASIC19.74■□□□□ 0.75
C9orf72Q96LT7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
C9orf72Q96LT7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 AC026471.1-201ENST00000564629 3026 ntBASIC19.73■□□□□ 0.75
C9orf72Q96LT7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 PRORSD1P-201ENST00000295112 541 ntBASIC19.73■□□□□ 0.75
C9orf72Q96LT7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 AC060766.5-201ENST00000590539 871 ntBASIC19.73■□□□□ 0.75
C9orf72Q96LT7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
C9orf72Q96LT7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 AC026366.1-201ENST00000488803 879 ntBASIC19.72■□□□□ 0.75
C9orf72Q96LT7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
C9orf72Q96LT7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 AP003097.1-201ENST00000530657 1135 ntBASIC19.71■□□□□ 0.75
C9orf72Q96LT7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 AC006058.3-201ENST00000606217 1069 ntBASIC19.71■□□□□ 0.75
C9orf72Q96LT7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
C9orf72Q96LT7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms