Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.4■□□□□ 0.54
DCHS1Q96JQ0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.4■□□□□ 0.54
DCHS1Q96JQ0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.4■□□□□ 0.54
DCHS1Q96JQ0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 AC116407.3-201ENST00000623905 1129 ntBASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 Z69720.1-201ENST00000601483 472 ntBASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 AC104109.2-201ENST00000602919 1418 ntBASIC18.39■□□□□ 0.53
DCHS1Q96JQ0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 AC092364.2-202ENST00000597012 1073 ntBASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DCHS1Q96JQ0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 MED15P5-201ENST00000423150 992 ntBASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 AC034105.1-201ENST00000563488 319 ntBASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DCHS1Q96JQ0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AC211486.1-202ENST00000416371 468 ntBASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AC211476.1-201ENST00000503899 468 ntBASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AC083906.6-201ENST00000641366 219 ntBASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AC079781.4-201ENST00000641908 219 ntBASIC18.36■□□□□ 0.53
DCHS1Q96JQ0 AC036111.1-201ENST00000533973 1582 ntBASIC18.35■□□□□ 0.53
DCHS1Q96JQ0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms