Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ECHDC3Q96DC8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 CA15P1-201ENST00000481698 905 ntBASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AC145285.6-201ENST00000604632 637 ntBASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AC133561.5-201ENST00000635547 218 ntBASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ECHDC3Q96DC8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 EGLN1P1-201ENST00000531623 762 ntBASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 C2orf69P3-201ENST00000565542 1120 ntBASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ECHDC3Q96DC8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 AL032819.2-201ENST00000624543 2162 ntBASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 AC141586.3-201ENST00000562166 1838 ntBASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 SLC25A1P2-201ENST00000430693 912 ntBASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
ECHDC3Q96DC8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms