Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 TSPY19P-201ENST00000418461 509 ntBASIC23.51■■□□□ 1.35
CNKSR1Q969H4 TSPY18P-201ENST00000441642 509 ntBASIC23.51■■□□□ 1.35
CNKSR1Q969H4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR1Q969H4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 EMBP1-201ENST00000458200 901 ntBASIC23.5■■□□□ 1.35
CNKSR1Q969H4 AC009078.2-202ENST00000463353 338 ntBASIC23.5■■□□□ 1.35
CNKSR1Q969H4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 GPAT2P1-201ENST00000444924 1672 ntBASIC23.5■■□□□ 1.35
CNKSR1Q969H4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR1Q969H4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.49■■□□□ 1.35
CNKSR1Q969H4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 GPALPP1-207ENST00000611650 899 ntBASIC23.49■■□□□ 1.35
CNKSR1Q969H4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR1Q969H4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 HLA-F-220ENST00000434407 884 ntBASIC23.48■■□□□ 1.35
CNKSR1Q969H4 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.48■■□□□ 1.35
CNKSR1Q969H4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 KRT18P1-202ENST00000452408 1331 ntBASIC23.48■■□□□ 1.35
CNKSR1Q969H4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.48■■□□□ 1.35
CNKSR1Q969H4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR1Q969H4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms