Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MIR3180-1-201ENST00000580374 94 ntBASIC21.73■■□□□ 1.07
USP6NLQ92738 MIR3180-3-201ENST00000584616 94 ntBASIC21.73■■□□□ 1.07
USP6NLQ92738 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.73■■□□□ 1.07
USP6NLQ92738 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
USP6NLQ92738 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USP6NLQ92738 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
USP6NLQ92738 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
USP6NLQ92738 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
USP6NLQ92738 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
USP6NLQ92738 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
USP6NLQ92738 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6NLQ92738 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
USP6NLQ92738 FDX1P1-201ENST00000449115 551 ntBASIC21.72■■□□□ 1.07
USP6NLQ92738 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6NLQ92738 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6NLQ92738 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6NLQ92738 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6NLQ92738 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6NLQ92738 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 AC020907.5-201ENST00000624372 1936 ntBASIC21.71■■□□□ 1.07
USP6NLQ92738 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
USP6NLQ92738 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6NLQ92738 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
USP6NLQ92738 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6NLQ92738 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.71■■□□□ 1.07
USP6NLQ92738 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
USP6NLQ92738 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
USP6NLQ92738 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.71■■□□□ 1.07
USP6NLQ92738 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.71■■□□□ 1.07
USP6NLQ92738 RN7SL510P-201ENST00000581311 263 ntBASIC21.71■■□□□ 1.07
USP6NLQ92738 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
USP6NLQ92738 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6NLQ92738 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.71■■□□□ 1.07
USP6NLQ92738 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
USP6NLQ92738 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6NLQ92738 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6NLQ92738 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.7■■□□□ 1.07
USP6NLQ92738 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
USP6NLQ92738 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
USP6NLQ92738 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.7■■□□□ 1.06
USP6NLQ92738 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.7■■□□□ 1.06
USP6NLQ92738 MIR3652-201ENST00000579335 131 ntBASIC21.7■■□□□ 1.06
USP6NLQ92738 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
USP6NLQ92738 AC092329.2-201ENST00000598402 547 ntBASIC21.7■■□□□ 1.06
USP6NLQ92738 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.7■■□□□ 1.06
USP6NLQ92738 AC016734.2-201ENST00000624325 1377 ntBASIC21.7■■□□□ 1.06
USP6NLQ92738 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 AL691432.2-201ENST00000607222 2038 ntBASIC21.7■■□□□ 1.06
USP6NLQ92738 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6NLQ92738 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6NLQ92738 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.69■■□□□ 1.06
USP6NLQ92738 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6NLQ92738 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
USP6NLQ92738 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.69■■□□□ 1.06
USP6NLQ92738 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP6NLQ92738 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
USP6NLQ92738 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.69■■□□□ 1.06
USP6NLQ92738 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.69■■□□□ 1.06
USP6NLQ92738 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms