Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 MIR663A-201ENST00000385250 93 ntBASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 AC091874.3-201ENST00000512672 1195 ntBASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 AC092118.2-201ENST00000613495 667 ntBASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SLC44A1Q8WWI5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 AL354751.1-201ENST00000412768 1863 ntBASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 AC026185.1-201ENST00000445748 174 ntBASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 AC090192.1-201ENST00000517740 490 ntBASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC44A1Q8WWI5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 AC083906.6-201ENST00000641366 219 ntBASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC44A1Q8WWI5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms