Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 ESPNP-201ENST00000270691 2015 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 PBX2P1-201ENST00000493219 1291 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 AC023632.3-201ENST00000521633 145 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 MFSD11-216ENST00000590393 1141 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 AC106739.1-201ENST00000617035 715 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 AC083906.6-201ENST00000641366 219 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 AC116351.2-201ENST00000606540 1585 ntBASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM4Q8WVI0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 AC105020.6-201ENST00000621523 1217 ntBASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 SDHAP1-207ENST00000440850 2000 ntBASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM4Q8WVI0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.39■□□□□ 0.22
SMIM4Q8WVI0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.39■□□□□ 0.21
SMIM4Q8WVI0 LINC02228-203ENST00000641970 1355 ntBASIC16.38■□□□□ 0.21
SMIM4Q8WVI0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM4Q8WVI0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM4Q8WVI0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM4Q8WVI0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms