Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 EMBP1-201ENST00000458200 901 ntBASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
LINC00116Q8NCU8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 NUS1P1-201ENST00000446295 882 ntBASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 KRT8P26-201ENST00000534154 1276 ntBASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 AC104692.2-201ENST00000603054 253 ntBASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 AL031008.1-201ENST00000619963 541 ntBASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 AL512408.1-201ENST00000569378 2000 ntBASIC24.33■■□□□ 1.49
LINC00116Q8NCU8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LINC00116Q8NCU8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.33■■□□□ 1.48
LINC00116Q8NCU8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 AL023284.2-201ENST00000405850 579 ntBASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 SEC1P-202ENST00000473944 940 ntBASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LINC00116Q8NCU8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 HLA-F-220ENST00000434407 884 ntBASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 AC093525.10-201ENST00000625130 1569 ntBASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 AC073314.1-201ENST00000568729 2216 ntBASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00116Q8NCU8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 TSPY19P-201ENST00000418461 509 ntBASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 CHCHD2P8-201ENST00000429873 447 ntBASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 TSPY18P-201ENST00000441642 509 ntBASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
LINC00116Q8NCU8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 AL157888.1-201ENST00000631930 593 ntBASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.29■■□□□ 1.48
LINC00116Q8NCU8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LINC00116Q8NCU8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LINC00116Q8NCU8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.28■■□□□ 1.48
LINC00116Q8NCU8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms