Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21■□□□□ 0.95
RDH13Q8NBN7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21■□□□□ 0.95
RDH13Q8NBN7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21■□□□□ 0.95
RDH13Q8NBN7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21■□□□□ 0.95
RDH13Q8NBN7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21■□□□□ 0.95
RDH13Q8NBN7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21■□□□□ 0.95
RDH13Q8NBN7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21■□□□□ 0.95
RDH13Q8NBN7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21■□□□□ 0.95
RDH13Q8NBN7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21■□□□□ 0.95
RDH13Q8NBN7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21■□□□□ 0.95
RDH13Q8NBN7 AC073195.1-201ENST00000607241 877 ntBASIC21■□□□□ 0.95
RDH13Q8NBN7 AL445675.2-201ENST00000620291 557 ntBASIC21■□□□□ 0.95
RDH13Q8NBN7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21■□□□□ 0.95
RDH13Q8NBN7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21■□□□□ 0.95
RDH13Q8NBN7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21■□□□□ 0.95
RDH13Q8NBN7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RDH13Q8NBN7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21■□□□□ 0.95
RDH13Q8NBN7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 AC008550.1-201ENST00000511500 884 ntBASIC20.99■□□□□ 0.95
RDH13Q8NBN7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 AC131212.4-201ENST00000623606 975 ntBASIC20.99■□□□□ 0.95
RDH13Q8NBN7 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.99■□□□□ 0.95
RDH13Q8NBN7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RDH13Q8NBN7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 KRT16P1-201ENST00000399124 1418 ntBASIC20.98■□□□□ 0.95
RDH13Q8NBN7 AL135905.2-201ENST00000584934 1404 ntBASIC20.98■□□□□ 0.95
RDH13Q8NBN7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 AC004980.1-204ENST00000429707 299 ntBASIC20.98■□□□□ 0.95
RDH13Q8NBN7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.98■□□□□ 0.95
RDH13Q8NBN7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 CD177P1-201ENST00000606252 935 ntBASIC20.97■□□□□ 0.95
RDH13Q8NBN7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 AP006294.2-201ENST00000641667 209 ntBASIC20.97■□□□□ 0.95
RDH13Q8NBN7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RDH13Q8NBN7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RDH13Q8NBN7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RDH13Q8NBN7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RDH13Q8NBN7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.96■□□□□ 0.95
RDH13Q8NBN7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RDH13Q8NBN7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RDH13Q8NBN7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms