Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TSPY23P-201ENST00000440136 739 ntBASIC19.7■□□□□ 0.74
RTL3Q8N8U3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 AP000692.2-201ENST00000608391 879 ntBASIC19.69■□□□□ 0.74
RTL3Q8N8U3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 KRT17P2-201ENST00000300992 1314 ntBASIC19.69■□□□□ 0.74
RTL3Q8N8U3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL3Q8N8U3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 FAM207BP-201ENST00000447172 505 ntBASIC19.68■□□□□ 0.74
RTL3Q8N8U3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 DGCR10-201ENST00000609839 495 ntBASIC19.68■□□□□ 0.74
RTL3Q8N8U3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 KRT8P11-201ENST00000409686 1436 ntBASIC19.68■□□□□ 0.74
RTL3Q8N8U3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTL3Q8N8U3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL3Q8N8U3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
RTL3Q8N8U3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms