Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME8Q8N427 AC104417.2-201ENST00000562989 1793 ntBASIC21.13■□□□□ 0.97
NME8Q8N427 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME8Q8N427 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 AIRN-201ENST00000601203 4374 ntBASIC21.12■□□□□ 0.97
NME8Q8N427 TCF3P1-201ENST00000423021 1937 ntBASIC21.12■□□□□ 0.97
NME8Q8N427 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NME8Q8N427 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.12■□□□□ 0.97
NME8Q8N427 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.12■□□□□ 0.97
NME8Q8N427 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.12■□□□□ 0.97
NME8Q8N427 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.12■□□□□ 0.97
NME8Q8N427 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NME8Q8N427 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.12■□□□□ 0.97
NME8Q8N427 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.12■□□□□ 0.97
NME8Q8N427 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NME8Q8N427 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME8Q8N427 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.12■□□□□ 0.97
NME8Q8N427 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NME8Q8N427 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NME8Q8N427 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.11■□□□□ 0.97
NME8Q8N427 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.11■□□□□ 0.97
NME8Q8N427 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NME8Q8N427 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.11■□□□□ 0.97
NME8Q8N427 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.11■□□□□ 0.97
NME8Q8N427 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.11■□□□□ 0.97
NME8Q8N427 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NME8Q8N427 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.11■□□□□ 0.97
NME8Q8N427 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NME8Q8N427 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME8Q8N427 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
NME8Q8N427 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
NME8Q8N427 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.1■□□□□ 0.97
NME8Q8N427 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NME8Q8N427 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.1■□□□□ 0.97
NME8Q8N427 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.1■□□□□ 0.97
NME8Q8N427 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.1■□□□□ 0.97
NME8Q8N427 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.1■□□□□ 0.97
NME8Q8N427 AC011558.1-201ENST00000623459 338 ntBASIC21.1■□□□□ 0.97
NME8Q8N427 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NME8Q8N427 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
NME8Q8N427 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.1■□□□□ 0.97
NME8Q8N427 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME8Q8N427 LINC01006-201ENST00000333319 2292 ntBASIC21.09■□□□□ 0.97
NME8Q8N427 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 ZNF815P-204ENST00000434898 1737 ntBASIC21.09■□□□□ 0.97
NME8Q8N427 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
NME8Q8N427 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.09■□□□□ 0.97
NME8Q8N427 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
NME8Q8N427 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.09■□□□□ 0.97
NME8Q8N427 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.09■□□□□ 0.97
NME8Q8N427 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NME8Q8N427 AC140113.3-201ENST00000605663 199 ntBASIC21.09■□□□□ 0.97
NME8Q8N427 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.09■□□□□ 0.97
NME8Q8N427 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NME8Q8N427 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.09■□□□□ 0.97
NME8Q8N427 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME8Q8N427 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms