Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 AC006011.2-201ENST00000621313 1158 ntBASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 LIN28AP1-201ENST00000429574 405 ntBASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 ATP5G1P1-201ENST00000448724 379 ntBASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 AC104076.2-201ENST00000448912 469 ntBASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC60Q8IWA6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 TSPY21P-201ENST00000433481 731 ntBASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 AP003041.3-201ENST00000527151 707 ntBASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.34■■□□□ 1.01
CCDC60Q8IWA6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 AL138966.2-201ENST00000621997 464 ntBASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC60Q8IWA6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.33■■□□□ 1
CCDC60Q8IWA6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC60Q8IWA6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.33■■□□□ 1
CCDC60Q8IWA6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.32■■□□□ 1
CCDC60Q8IWA6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC60Q8IWA6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC60Q8IWA6 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.32■■□□□ 1
CCDC60Q8IWA6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCDC60Q8IWA6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC60Q8IWA6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CCDC60Q8IWA6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms