Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL391422.3-201ENST00000603791 2761 ntBASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 AIRN-201ENST00000601203 4374 ntBASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 AC026396.1-201ENST00000419388 421 ntBASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 CLEC4GP1-201ENST00000596555 870 ntBASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC149Q6ZUS6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 KRT18P38-201ENST00000449496 1282 ntBASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 AL136038.3-201ENST00000561909 1096 ntBASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 AL691432.3-201ENST00000621860 400 ntBASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC149Q6ZUS6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC149Q6ZUS6 AL137060.1-201ENST00000618151 2648 ntBASIC20.14■□□□□ 0.82
CCDC149Q6ZUS6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC149Q6ZUS6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 NEK4P2-201ENST00000580004 1012 ntBASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC149Q6ZUS6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 AC104417.2-201ENST00000562989 1793 ntBASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC149Q6ZUS6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC149Q6ZUS6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC149Q6ZUS6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC149Q6ZUS6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC149Q6ZUS6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC149Q6ZUS6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CCDC149Q6ZUS6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms