Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 FAM197Y1-201ENST00000421178 764 ntBASIC17.98■□□□□ 0.47
RTL4Q6ZR62 KSR1P1-201ENST00000446298 240 ntBASIC17.98■□□□□ 0.47
RTL4Q6ZR62 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RTL4Q6ZR62 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 AC120498.9-201ENST00000339021 3867 ntBASIC17.97■□□□□ 0.47
RTL4Q6ZR62 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 AL355355.2-201ENST00000442321 338 ntBASIC17.97■□□□□ 0.47
RTL4Q6ZR62 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL4Q6ZR62 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 AC026471.5-201ENST00000615068 467 ntBASIC17.96■□□□□ 0.47
RTL4Q6ZR62 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL4Q6ZR62 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.96■□□□□ 0.46
RTL4Q6ZR62 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 KRT16P1-201ENST00000399124 1418 ntBASIC17.95■□□□□ 0.46
RTL4Q6ZR62 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL4Q6ZR62 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RTL4Q6ZR62 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms