Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFWD3Q6PCD5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 UNC93B2-201ENST00000285383 730 ntBASIC20■□□□□ 0.79
RFWD3Q6PCD5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 B3GAT3P1-201ENST00000471720 806 ntBASIC20■□□□□ 0.79
RFWD3Q6PCD5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AC026271.3-201ENST00000571884 352 ntBASIC20■□□□□ 0.79
RFWD3Q6PCD5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20■□□□□ 0.79
RFWD3Q6PCD5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RFWD3Q6PCD5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFWD3Q6PCD5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 AC211429.1-201ENST00000415277 523 ntBASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 AC087499.1-201ENST00000418141 1075 ntBASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 AL390955.1-201ENST00000428694 934 ntBASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 RCC2P6-201ENST00000526625 1557 ntBASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 FSCN1P1-201ENST00000568912 1481 ntBASIC19.99■□□□□ 0.79
RFWD3Q6PCD5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 AC008040.2-201ENST00000461049 708 ntBASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 AL160286.2-201ENST00000567150 934 ntBASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 KRT8P9-201ENST00000558927 1449 ntBASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 AL158211.5-201ENST00000623583 2518 ntBASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RFWD3Q6PCD5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 AC026471.1-201ENST00000564629 3026 ntBASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 MIR1238-201ENST00000408483 83 ntBASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 ECEL1P3-201ENST00000427961 737 ntBASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 Z85996.1-201ENST00000494644 937 ntBASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFWD3Q6PCD5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms